Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.76■□□□□ 0.75
CYP3A4P08684 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CYP3A4P08684 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CYP3A4P08684 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CYP3A4P08684 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CYP3A4P08684 NCF1C-201ENST00000438382 1427 ntBASIC19.76■□□□□ 0.75
CYP3A4P08684 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.76■□□□□ 0.75
CYP3A4P08684 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.75■□□□□ 0.75
CYP3A4P08684 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.75■□□□□ 0.75
CYP3A4P08684 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.75■□□□□ 0.75
CYP3A4P08684 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.75■□□□□ 0.75
CYP3A4P08684 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CYP3A4P08684 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.75■□□□□ 0.75
CYP3A4P08684 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.75■□□□□ 0.75
CYP3A4P08684 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.75■□□□□ 0.75
CYP3A4P08684 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
CYP3A4P08684 AC004706.3-202ENST00000621574 984 ntBASIC19.75■□□□□ 0.75
CYP3A4P08684 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CYP3A4P08684 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP3A4P08684 AL135999.2-201ENST00000622438 1686 ntBASIC19.75■□□□□ 0.75
CYP3A4P08684 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.74■□□□□ 0.75
CYP3A4P08684 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CYP3A4P08684 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CYP3A4P08684 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CYP3A4P08684 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 ACTG1P4-201ENST00000425123 1122 ntBASIC19.74■□□□□ 0.75
CYP3A4P08684 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.74■□□□□ 0.75
CYP3A4P08684 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.74■□□□□ 0.75
CYP3A4P08684 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.74■□□□□ 0.75
CYP3A4P08684 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.74■□□□□ 0.75
CYP3A4P08684 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.74■□□□□ 0.75
CYP3A4P08684 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CYP3A4P08684 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CYP3A4P08684 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 AC243591.1-201ENST00000452967 1364 ntBASIC19.73■□□□□ 0.75
CYP3A4P08684 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CYP3A4P08684 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CYP3A4P08684 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.73■□□□□ 0.75
CYP3A4P08684 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 AC073621.1-201ENST00000392730 636 ntBASIC19.73■□□□□ 0.75
CYP3A4P08684 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.73■□□□□ 0.75
CYP3A4P08684 AC093909.1-201ENST00000504731 1122 ntBASIC19.73■□□□□ 0.75
CYP3A4P08684 AC105339.3-201ENST00000560043 636 ntBASIC19.73■□□□□ 0.75
CYP3A4P08684 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
CYP3A4P08684 AC006557.2-201ENST00000592985 1240 ntBASIC19.73■□□□□ 0.75
CYP3A4P08684 AC116407.3-201ENST00000623905 1129 ntBASIC19.73■□□□□ 0.75
CYP3A4P08684 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 AC097637.2-201ENST00000624096 1997 ntBASIC19.73■□□□□ 0.75
CYP3A4P08684 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CYP3A4P08684 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP3A4P08684 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CYP3A4P08684 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.72■□□□□ 0.75
CYP3A4P08684 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CYP3A4P08684 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CYP3A4P08684 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.72■□□□□ 0.75
CYP3A4P08684 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CYP3A4P08684 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CYP3A4P08684 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.72■□□□□ 0.75
CYP3A4P08684 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CYP3A4P08684 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
CYP3A4P08684 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.72■□□□□ 0.75
CYP3A4P08684 LINC00982-205ENST00000420957 435 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms