Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 HMGN1P19-201ENST00000436976 333 ntBASIC19.39■□□□□ 0.69
MMP3P08254 RHOQP3-201ENST00000437982 621 ntBASIC19.39■□□□□ 0.69
MMP3P08254 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.39■□□□□ 0.69
MMP3P08254 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.39■□□□□ 0.69
MMP3P08254 SNHG9-202ENST00000564014 471 ntBASIC19.39■□□□□ 0.69
MMP3P08254 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.39■□□□□ 0.69
MMP3P08254 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP3P08254 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
MMP3P08254 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP3P08254 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MMP3P08254 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP3P08254 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP3P08254 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP3P08254 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP3P08254 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP3P08254 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MMP3P08254 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP3P08254 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP3P08254 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP3P08254 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP3P08254 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP3P08254 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MMP3P08254 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP3P08254 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MMP3P08254 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP3P08254 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.38■□□□□ 0.69
MMP3P08254 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP3P08254 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MMP3P08254 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP3P08254 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.38■□□□□ 0.69
MMP3P08254 ELL2P1-201ENST00000413990 1906 ntBASIC19.38■□□□□ 0.69
MMP3P08254 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.38■□□□□ 0.69
MMP3P08254 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP3P08254 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.38■□□□□ 0.69
MMP3P08254 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MMP3P08254 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.38■□□□□ 0.69
MMP3P08254 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
MMP3P08254 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.38■□□□□ 0.69
MMP3P08254 REXO1L11P-201ENST00000620964 1927 ntBASIC19.38■□□□□ 0.69
MMP3P08254 AC004408.2-201ENST00000623613 2777 ntBASIC19.38■□□□□ 0.69
MMP3P08254 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP3P08254 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.38■□□□□ 0.69
MMP3P08254 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
MMP3P08254 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP3P08254 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP3P08254 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP3P08254 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.37■□□□□ 0.69
MMP3P08254 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.37■□□□□ 0.69
MMP3P08254 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP3P08254 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.37■□□□□ 0.69
MMP3P08254 KRT18P28-201ENST00000453838 1332 ntBASIC19.37■□□□□ 0.69
MMP3P08254 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP3P08254 AC104581.1-202ENST00000635932 2618 ntBASIC19.37■□□□□ 0.69
MMP3P08254 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP3P08254 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP3P08254 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP3P08254 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MMP3P08254 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP3P08254 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.37■□□□□ 0.69
MMP3P08254 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
MMP3P08254 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP3P08254 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MMP3P08254 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
MMP3P08254 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP3P08254 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
MMP3P08254 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
MMP3P08254 AC009113.1-201ENST00000570267 2443 ntBASIC19.37■□□□□ 0.69
MMP3P08254 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP3P08254 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP3P08254 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP3P08254 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MMP3P08254 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.37■□□□□ 0.69
MMP3P08254 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP3P08254 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP3P08254 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MMP3P08254 AC138028.4-201ENST00000564984 1845 ntBASIC19.37■□□□□ 0.69
MMP3P08254 AC046185.3-201ENST00000623228 1824 ntBASIC19.37■□□□□ 0.69
MMP3P08254 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP3P08254 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
MMP3P08254 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
MMP3P08254 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MMP3P08254 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MMP3P08254 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.36■□□□□ 0.69
MMP3P08254 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MMP3P08254 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP3P08254 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.36■□□□□ 0.69
MMP3P08254 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP3P08254 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
MMP3P08254 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP3P08254 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.36■□□□□ 0.69
MMP3P08254 METTL21AP1-201ENST00000438852 635 ntBASIC19.36■□□□□ 0.69
MMP3P08254 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.36■□□□□ 0.69
MMP3P08254 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.36■□□□□ 0.69
MMP3P08254 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.36■□□□□ 0.69
MMP3P08254 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.36■□□□□ 0.69
MMP3P08254 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.36■□□□□ 0.69
MMP3P08254 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP3P08254 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP3P08254 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
MMP3P08254 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms