Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.26■□□□□ 0.67
VTNP04004 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.26■□□□□ 0.67
VTNP04004 AL591424.1-201ENST00000442569 1213 ntBASIC19.26■□□□□ 0.67
VTNP04004 AC108751.1-201ENST00000490852 363 ntBASIC19.26■□□□□ 0.67
VTNP04004 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.26■□□□□ 0.67
VTNP04004 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 AL139424.1-201ENST00000607572 797 ntBASIC19.26■□□□□ 0.67
VTNP04004 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.26■□□□□ 0.67
VTNP04004 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.26■□□□□ 0.67
VTNP04004 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
VTNP04004 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.26■□□□□ 0.67
VTNP04004 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.26■□□□□ 0.67
VTNP04004 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
VTNP04004 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VTNP04004 AC097637.2-201ENST00000624096 1997 ntBASIC19.26■□□□□ 0.67
VTNP04004 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.26■□□□□ 0.67
VTNP04004 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VTNP04004 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VTNP04004 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
VTNP04004 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.25■□□□□ 0.67
VTNP04004 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VTNP04004 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VTNP04004 REXO1L11P-201ENST00000620964 1927 ntBASIC19.25■□□□□ 0.67
VTNP04004 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VTNP04004 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.25■□□□□ 0.67
VTNP04004 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
VTNP04004 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
VTNP04004 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VTNP04004 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VTNP04004 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VTNP04004 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VTNP04004 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.25■□□□□ 0.67
VTNP04004 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VTNP04004 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VTNP04004 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
VTNP04004 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VTNP04004 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.25■□□□□ 0.67
VTNP04004 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.25■□□□□ 0.67
VTNP04004 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.25■□□□□ 0.67
VTNP04004 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.25■□□□□ 0.67
VTNP04004 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.25■□□□□ 0.67
VTNP04004 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.25■□□□□ 0.67
VTNP04004 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.25■□□□□ 0.67
VTNP04004 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
VTNP04004 PGM5P2-202ENST00000637225 1043 ntBASIC19.25■□□□□ 0.67
VTNP04004 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
VTNP04004 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.25■□□□□ 0.67
VTNP04004 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VTNP04004 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VTNP04004 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.25■□□□□ 0.67
VTNP04004 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.25■□□□□ 0.67
VTNP04004 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.25■□□□□ 0.67
VTNP04004 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VTNP04004 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VTNP04004 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VTNP04004 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.24■□□□□ 0.67
VTNP04004 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
VTNP04004 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.24■□□□□ 0.67
VTNP04004 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.24■□□□□ 0.67
VTNP04004 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.24■□□□□ 0.67
VTNP04004 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VTNP04004 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VTNP04004 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.24■□□□□ 0.67
VTNP04004 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VTNP04004 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.24■□□□□ 0.67
VTNP04004 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.24■□□□□ 0.67
VTNP04004 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VTNP04004 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VTNP04004 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VTNP04004 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.24■□□□□ 0.67
VTNP04004 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
VTNP04004 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VTNP04004 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.24■□□□□ 0.67
VTNP04004 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VTNP04004 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.24■□□□□ 0.67
VTNP04004 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
VTNP04004 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VTNP04004 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VTNP04004 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.23■□□□□ 0.67
VTNP04004 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.23■□□□□ 0.67
VTNP04004 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
VTNP04004 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.23■□□□□ 0.67
VTNP04004 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.23■□□□□ 0.67
VTNP04004 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VTNP04004 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.23■□□□□ 0.67
VTNP04004 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms