Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TOP3BO95985 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP3BO95985 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.07■□□□□ 0.48
TOP3BO95985 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP3BO95985 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
TOP3BO95985 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP3BO95985 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TOP3BO95985 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 AC243591.1-201ENST00000452967 1364 ntBASIC18.06■□□□□ 0.48
TOP3BO95985 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.06■□□□□ 0.48
TOP3BO95985 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TOP3BO95985 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.06■□□□□ 0.48
TOP3BO95985 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.06■□□□□ 0.48
TOP3BO95985 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.06■□□□□ 0.48
TOP3BO95985 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.06■□□□□ 0.48
TOP3BO95985 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.06■□□□□ 0.48
TOP3BO95985 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.06■□□□□ 0.48
TOP3BO95985 AL031284.1-201ENST00000419297 478 ntBASIC18.06■□□□□ 0.48
TOP3BO95985 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 FAM197Y8-203ENST00000450145 560 ntBASIC18.06■□□□□ 0.48
TOP3BO95985 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.06■□□□□ 0.48
TOP3BO95985 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.06■□□□□ 0.48
TOP3BO95985 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TOP3BO95985 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.06■□□□□ 0.48
TOP3BO95985 AC027796.2-201ENST00000575326 344 ntBASIC18.06■□□□□ 0.48
TOP3BO95985 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.06■□□□□ 0.48
TOP3BO95985 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.06■□□□□ 0.48
TOP3BO95985 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.06■□□□□ 0.48
TOP3BO95985 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TOP3BO95985 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
TOP3BO95985 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TOP3BO95985 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.06■□□□□ 0.48
TOP3BO95985 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TOP3BO95985 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TOP3BO95985 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.06■□□□□ 0.48
TOP3BO95985 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TOP3BO95985 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TOP3BO95985 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 AL024508.2-201ENST00000607749 1894 ntBASIC18.05■□□□□ 0.48
TOP3BO95985 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.05■□□□□ 0.48
TOP3BO95985 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TOP3BO95985 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.05■□□□□ 0.48
TOP3BO95985 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.05■□□□□ 0.48
TOP3BO95985 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.05■□□□□ 0.48
TOP3BO95985 AC064862.7-201ENST00000604520 867 ntBASIC18.05■□□□□ 0.48
TOP3BO95985 IGHV3-41-201ENST00000613121 348 ntBASIC18.05■□□□□ 0.48
TOP3BO95985 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TOP3BO95985 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TOP3BO95985 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TOP3BO95985 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.05■□□□□ 0.48
TOP3BO95985 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.05■□□□□ 0.48
TOP3BO95985 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 AC100803.2-201ENST00000562459 1963 ntBASIC18.04■□□□□ 0.48
TOP3BO95985 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.04■□□□□ 0.48
TOP3BO95985 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.04■□□□□ 0.48
TOP3BO95985 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.04■□□□□ 0.48
TOP3BO95985 AC009065.1-201ENST00000564055 1225 ntBASIC18.04■□□□□ 0.48
TOP3BO95985 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TOP3BO95985 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.04■□□□□ 0.48
TOP3BO95985 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms