Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD3O95983 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MBD3O95983 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.21■□□□□ 0.83
MBD3O95983 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.21■□□□□ 0.83
MBD3O95983 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.21■□□□□ 0.83
MBD3O95983 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.21■□□□□ 0.83
MBD3O95983 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MBD3O95983 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.21■□□□□ 0.83
MBD3O95983 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MBD3O95983 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.21■□□□□ 0.83
MBD3O95983 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.21■□□□□ 0.83
MBD3O95983 SEC1P-202ENST00000473944 940 ntBASIC20.21■□□□□ 0.83
MBD3O95983 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.21■□□□□ 0.83
MBD3O95983 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.21■□□□□ 0.83
MBD3O95983 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
MBD3O95983 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.21■□□□□ 0.83
MBD3O95983 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.21■□□□□ 0.83
MBD3O95983 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
MBD3O95983 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.21■□□□□ 0.83
MBD3O95983 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.21■□□□□ 0.83
MBD3O95983 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD3O95983 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
MBD3O95983 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
MBD3O95983 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.2■□□□□ 0.82
MBD3O95983 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MBD3O95983 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.2■□□□□ 0.82
MBD3O95983 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MBD3O95983 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.2■□□□□ 0.82
MBD3O95983 KRT18P6-201ENST00000555540 1265 ntBASIC20.2■□□□□ 0.82
MBD3O95983 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MBD3O95983 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.2■□□□□ 0.82
MBD3O95983 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MBD3O95983 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.2■□□□□ 0.82
MBD3O95983 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MBD3O95983 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3O95983 AC092338.2-201ENST00000568827 1415 ntBASIC20.19■□□□□ 0.82
MBD3O95983 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3O95983 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.19■□□□□ 0.82
MBD3O95983 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3O95983 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3O95983 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
MBD3O95983 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MBD3O95983 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.19■□□□□ 0.82
MBD3O95983 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
MBD3O95983 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3O95983 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3O95983 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3O95983 BX088651.1-201ENST00000540551 451 ntBASIC20.19■□□□□ 0.82
MBD3O95983 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3O95983 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.19■□□□□ 0.82
MBD3O95983 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
MBD3O95983 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.19■□□□□ 0.82
MBD3O95983 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MBD3O95983 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.19■□□□□ 0.82
MBD3O95983 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.19■□□□□ 0.82
MBD3O95983 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.19■□□□□ 0.82
MBD3O95983 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
MBD3O95983 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
MBD3O95983 AC026691.1-201ENST00000602502 2017 ntBASIC20.19■□□□□ 0.82
MBD3O95983 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.19■□□□□ 0.82
MBD3O95983 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3O95983 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MBD3O95983 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3O95983 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3O95983 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.18■□□□□ 0.82
MBD3O95983 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MBD3O95983 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.18■□□□□ 0.82
MBD3O95983 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms