Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE6O95741 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
CPNE6O95741 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CPNE6O95741 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE6O95741 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CPNE6O95741 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE6O95741 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE6O95741 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.31■□□□□ 0.36
CPNE6O95741 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE6O95741 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CPNE6O95741 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CPNE6O95741 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE6O95741 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CPNE6O95741 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.3■□□□□ 0.36
CPNE6O95741 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CPNE6O95741 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.3■□□□□ 0.36
CPNE6O95741 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CPNE6O95741 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE6O95741 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
CPNE6O95741 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 FGFR3P6-201ENST00000457012 610 ntBASIC17.3■□□□□ 0.36
CPNE6O95741 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE6O95741 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE6O95741 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CPNE6O95741 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE6O95741 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE6O95741 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 GMCL1P1-201ENST00000463439 1581 ntBASIC17.3■□□□□ 0.36
CPNE6O95741 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE6O95741 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE6O95741 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE6O95741 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE6O95741 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE6O95741 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CPNE6O95741 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CPNE6O95741 AC018712.1-201ENST00000455767 687 ntBASIC17.29■□□□□ 0.36
CPNE6O95741 RNPS1P1-201ENST00000507437 918 ntBASIC17.29■□□□□ 0.36
CPNE6O95741 AC112698.1-201ENST00000510299 916 ntBASIC17.29■□□□□ 0.36
CPNE6O95741 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.29■□□□□ 0.36
CPNE6O95741 AP001269.4-201ENST00000609611 512 ntBASIC17.29■□□□□ 0.36
CPNE6O95741 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE6O95741 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE6O95741 AC023511.2-201ENST00000618803 211 ntBASIC17.29■□□□□ 0.36
CPNE6O95741 AC148477.8-201ENST00000624298 468 ntBASIC17.29■□□□□ 0.36
CPNE6O95741 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.29■□□□□ 0.36
CPNE6O95741 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE6O95741 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CPNE6O95741 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CPNE6O95741 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPNE6O95741 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE6O95741 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE6O95741 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CPNE6O95741 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CPNE6O95741 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPNE6O95741 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE6O95741 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE6O95741 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE6O95741 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE6O95741 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE6O95741 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE6O95741 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CPNE6O95741 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE6O95741 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE6O95741 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE6O95741 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE6O95741 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CPNE6O95741 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CPNE6O95741 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE6O95741 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE6O95741 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE6O95741 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE6O95741 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CPNE6O95741 PMS2P1-201ENST00000431037 1228 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms