Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LTN1O94822 HARS-203ENST00000431330 1774 ntTSL 2 BASIC23.12■■□□□ 1.29
LTN1O94822 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC23.12■■□□□ 1.29
LTN1O94822 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LTN1O94822 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
LTN1O94822 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LTN1O94822 HNRNPRP1-201ENST00000453465 1695 ntBASIC23.12■■□□□ 1.29
LTN1O94822 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LTN1O94822 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC23.12■■□□□ 1.29
LTN1O94822 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LTN1O94822 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
LTN1O94822 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LTN1O94822 WDR53-203ENST00000429115 683 ntTSL 2 BASIC23.12■■□□□ 1.29
LTN1O94822 SLBP-205ENST00000488267 987 ntTSL 2 BASIC23.12■■□□□ 1.29
LTN1O94822 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
LTN1O94822 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC23.12■■□□□ 1.29
LTN1O94822 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC23.12■■□□□ 1.29
LTN1O94822 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LTN1O94822 AC093520.2-201ENST00000561830 333 ntBASIC23.12■■□□□ 1.29
LTN1O94822 AL135744.1-201ENST00000565098 629 ntBASIC23.12■■□□□ 1.29
LTN1O94822 AC105339.1-204ENST00000636249 355 ntBASIC23.12■■□□□ 1.29
LTN1O94822 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LTN1O94822 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LTN1O94822 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LTN1O94822 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LTN1O94822 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
LTN1O94822 MIR770-201ENST00000390219 98 ntBASIC23.11■■□□□ 1.29
LTN1O94822 SPDYE11-202ENST00000450699 704 ntBASIC23.11■■□□□ 1.29
LTN1O94822 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC23.11■■□□□ 1.29
LTN1O94822 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC23.11■■□□□ 1.29
LTN1O94822 SPDYE9P-201ENST00000570642 692 ntBASIC23.11■■□□□ 1.29
LTN1O94822 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC23.11■■□□□ 1.29
LTN1O94822 SPDYE10P-202ENST00000612005 668 ntBASIC23.11■■□□□ 1.29
LTN1O94822 SPDYE8P-202ENST00000612377 668 ntBASIC23.11■■□□□ 1.29
LTN1O94822 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC23.11■■□□□ 1.29
LTN1O94822 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC23.11■■□□□ 1.29
LTN1O94822 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LTN1O94822 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LTN1O94822 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC23.11■■□□□ 1.29
LTN1O94822 AC129492.6-201ENST00000611383 1305 ntBASIC23.11■■□□□ 1.29
LTN1O94822 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC23.11■■□□□ 1.29
LTN1O94822 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LTN1O94822 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC23.11■■□□□ 1.29
LTN1O94822 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LTN1O94822 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC23.1■■□□□ 1.29
LTN1O94822 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC23.1■■□□□ 1.29
LTN1O94822 AL355306.1-201ENST00000415580 579 ntBASIC23.1■■□□□ 1.29
LTN1O94822 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC23.1■■□□□ 1.29
LTN1O94822 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC23.1■■□□□ 1.29
LTN1O94822 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC23.1■■□□□ 1.29
LTN1O94822 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LTN1O94822 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LTN1O94822 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC23.1■■□□□ 1.29
LTN1O94822 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC23.1■■□□□ 1.29
LTN1O94822 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LTN1O94822 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC23.1■■□□□ 1.29
LTN1O94822 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LTN1O94822 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LTN1O94822 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
LTN1O94822 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
LTN1O94822 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC23.09■■□□□ 1.29
LTN1O94822 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
LTN1O94822 HLA-J-203ENST00000494367 1087 ntBASIC23.09■■□□□ 1.29
LTN1O94822 KRT8P48-201ENST00000515599 1220 ntBASIC23.09■■□□□ 1.29
LTN1O94822 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LTN1O94822 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC23.09■■□□□ 1.29
LTN1O94822 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LTN1O94822 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC23.09■■□□□ 1.29
LTN1O94822 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LTN1O94822 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC23.09■■□□□ 1.29
LTN1O94822 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
LTN1O94822 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LTN1O94822 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LTN1O94822 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC23.09■■□□□ 1.29
LTN1O94822 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LTN1O94822 SYS1-203ENST00000414310 795 ntTSL 3 BASIC23.09■■□□□ 1.29
LTN1O94822 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
LTN1O94822 FAM8A3P-201ENST00000427218 844 ntBASIC23.09■■□□□ 1.29
LTN1O94822 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC23.09■■□□□ 1.29
LTN1O94822 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
LTN1O94822 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LTN1O94822 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LTN1O94822 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.09■■□□□ 1.29
LTN1O94822 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC23.09■■□□□ 1.29
LTN1O94822 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LTN1O94822 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LTN1O94822 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LTN1O94822 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.08■■□□□ 1.29
LTN1O94822 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LTN1O94822 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LTN1O94822 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LTN1O94822 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LTN1O94822 TIMM8BP1-201ENST00000452384 211 ntBASIC23.08■■□□□ 1.29
LTN1O94822 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
LTN1O94822 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LTN1O94822 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC23.08■■□□□ 1.29
LTN1O94822 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC23.08■■□□□ 1.29
LTN1O94822 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LTN1O94822 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
LTN1O94822 BSG-215ENST00000618006 1329 ntTSL 2 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms