Protein–RNA interactions for Protein: O94788

ALDH1A2, Retinal dehydrogenase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2O94788 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 AL355877.3-201ENST00000622820 899 ntBASIC18.29■□□□□ 0.52
ALDH1A2O94788 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ALDH1A2O94788 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALDH1A2O94788 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 RCN1P2-201ENST00000398357 915 ntBASIC18.28■□□□□ 0.52
ALDH1A2O94788 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.28■□□□□ 0.52
ALDH1A2O94788 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALDH1A2O94788 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A2O94788 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A2O94788 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A2O94788 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A2O94788 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A2O94788 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A2O94788 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A2O94788 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A2O94788 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A2O94788 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 AC068472.1-201ENST00000474589 881 ntBASIC18.27■□□□□ 0.52
ALDH1A2O94788 DUTP2-201ENST00000519164 463 ntBASIC18.27■□□□□ 0.52
ALDH1A2O94788 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A2O94788 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 MTDHP3-201ENST00000594186 672 ntBASIC18.27■□□□□ 0.52
ALDH1A2O94788 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A2O94788 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.27■□□□□ 0.52
ALDH1A2O94788 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALDH1A2O94788 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ALDH1A2O94788 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ALDH1A2O94788 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms