Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.85■□□□□ 0.45
KDELR3O43731 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KDELR3O43731 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KDELR3O43731 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KDELR3O43731 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
KDELR3O43731 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.84■□□□□ 0.45
KDELR3O43731 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.84■□□□□ 0.45
KDELR3O43731 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.84■□□□□ 0.45
KDELR3O43731 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.84■□□□□ 0.45
KDELR3O43731 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.84■□□□□ 0.45
KDELR3O43731 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.84■□□□□ 0.45
KDELR3O43731 PRYP5-201ENST00000451909 266 ntBASIC17.84■□□□□ 0.45
KDELR3O43731 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
KDELR3O43731 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.84■□□□□ 0.45
KDELR3O43731 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.84■□□□□ 0.45
KDELR3O43731 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KDELR3O43731 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.84■□□□□ 0.45
KDELR3O43731 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.84■□□□□ 0.45
KDELR3O43731 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.84■□□□□ 0.45
KDELR3O43731 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KDELR3O43731 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.84■□□□□ 0.45
KDELR3O43731 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
KDELR3O43731 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KDELR3O43731 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KDELR3O43731 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
KDELR3O43731 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KDELR3O43731 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.83■□□□□ 0.45
KDELR3O43731 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
KDELR3O43731 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KDELR3O43731 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
KDELR3O43731 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KDELR3O43731 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.83■□□□□ 0.44
KDELR3O43731 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.83■□□□□ 0.44
KDELR3O43731 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KDELR3O43731 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
KDELR3O43731 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
KDELR3O43731 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
KDELR3O43731 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.83■□□□□ 0.44
KDELR3O43731 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDELR3O43731 SIGLEC30P-201ENST00000455569 941 ntBASIC17.83■□□□□ 0.44
KDELR3O43731 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KDELR3O43731 TP73-AS1-207ENST00000624167 988 ntBASIC17.83■□□□□ 0.44
KDELR3O43731 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDELR3O43731 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.83■□□□□ 0.44
KDELR3O43731 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KDELR3O43731 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
KDELR3O43731 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.83■□□□□ 0.44
KDELR3O43731 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDELR3O43731 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.83■□□□□ 0.44
KDELR3O43731 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
KDELR3O43731 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
KDELR3O43731 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
KDELR3O43731 LYSMD4-203ENST00000378904 2122 ntBASIC17.83■□□□□ 0.44
KDELR3O43731 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDELR3O43731 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDELR3O43731 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KDELR3O43731 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KDELR3O43731 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDELR3O43731 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.82■□□□□ 0.44
KDELR3O43731 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.82■□□□□ 0.44
KDELR3O43731 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.82■□□□□ 0.44
KDELR3O43731 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.82■□□□□ 0.44
KDELR3O43731 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDELR3O43731 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.82■□□□□ 0.44
KDELR3O43731 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KDELR3O43731 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KDELR3O43731 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KDELR3O43731 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KDELR3O43731 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KDELR3O43731 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.82■□□□□ 0.44
KDELR3O43731 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.82■□□□□ 0.44
KDELR3O43731 FAM197Y8-203ENST00000450145 560 ntBASIC17.82■□□□□ 0.44
KDELR3O43731 BX005266.1-201ENST00000473402 457 ntBASIC17.82■□□□□ 0.44
KDELR3O43731 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.82■□□□□ 0.44
KDELR3O43731 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
KDELR3O43731 AP002469.2-201ENST00000531724 424 ntBASIC17.82■□□□□ 0.44
KDELR3O43731 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.82■□□□□ 0.44
KDELR3O43731 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms