Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MINOS1P3-201ENST00000457048 203 ntBASIC17.61■□□□□ 0.41
LDB2O43679 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
LDB2O43679 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.61■□□□□ 0.41
LDB2O43679 AC012615.1-201ENST00000565797 1299 ntBASIC17.61■□□□□ 0.41
LDB2O43679 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.61■□□□□ 0.41
LDB2O43679 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LDB2O43679 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.61■□□□□ 0.41
LDB2O43679 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LDB2O43679 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LDB2O43679 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LDB2O43679 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LDB2O43679 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.6■□□□□ 0.41
LDB2O43679 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.6■□□□□ 0.41
LDB2O43679 KRT8P10-201ENST00000450021 1447 ntBASIC17.6■□□□□ 0.41
LDB2O43679 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.6■□□□□ 0.41
LDB2O43679 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 AL023806.1-201ENST00000603994 1649 ntBASIC17.6■□□□□ 0.41
LDB2O43679 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.6■□□□□ 0.41
LDB2O43679 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LDB2O43679 INTS4P1-201ENST00000438455 1935 ntBASIC17.6■□□□□ 0.41
LDB2O43679 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.6■□□□□ 0.41
LDB2O43679 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
LDB2O43679 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.6■□□□□ 0.41
LDB2O43679 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.6■□□□□ 0.41
LDB2O43679 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.6■□□□□ 0.41
LDB2O43679 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB2O43679 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.59■□□□□ 0.41
LDB2O43679 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LDB2O43679 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LDB2O43679 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.59■□□□□ 0.41
LDB2O43679 RCN1P2-201ENST00000398357 915 ntBASIC17.59■□□□□ 0.41
LDB2O43679 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.59■□□□□ 0.41
LDB2O43679 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
LDB2O43679 AC104819.1-201ENST00000504587 486 ntBASIC17.59■□□□□ 0.41
LDB2O43679 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.59■□□□□ 0.41
LDB2O43679 AC096582.2-201ENST00000510860 516 ntBASIC17.59■□□□□ 0.41
LDB2O43679 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.59■□□□□ 0.41
LDB2O43679 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.59■□□□□ 0.41
LDB2O43679 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.59■□□□□ 0.41
LDB2O43679 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.59■□□□□ 0.41
LDB2O43679 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.59■□□□□ 0.41
LDB2O43679 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LDB2O43679 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
LDB2O43679 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.58■□□□□ 0.41
LDB2O43679 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
LDB2O43679 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LDB2O43679 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LDB2O43679 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LDB2O43679 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LDB2O43679 AL353593.2-201ENST00000602529 1483 ntBASIC17.58■□□□□ 0.41
LDB2O43679 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.58■□□□□ 0.41
LDB2O43679 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.58■□□□□ 0.41
LDB2O43679 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB2O43679 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LDB2O43679 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.58■□□□□ 0.4
LDB2O43679 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.58■□□□□ 0.4
LDB2O43679 KRT18P56-201ENST00000507275 550 ntBASIC17.58■□□□□ 0.4
LDB2O43679 IGHV3-52-201ENST00000519770 353 ntBASIC17.58■□□□□ 0.4
LDB2O43679 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LDB2O43679 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.58■□□□□ 0.4
LDB2O43679 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.58■□□□□ 0.4
LDB2O43679 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms