Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHF1O43189 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHF1O43189 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.27■□□□□ 0.03
PHF1O43189 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.27■□□□□ 0.03
PHF1O43189 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PHF1O43189 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PHF1O43189 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.27■□□□□ 0.03
PHF1O43189 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PHF1O43189 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.26■□□□□ 0.03
PHF1O43189 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PHF1O43189 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.26■□□□□ 0.03
PHF1O43189 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PHF1O43189 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PHF1O43189 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.26■□□□□ 0.03
PHF1O43189 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PHF1O43189 MRPL3P1-201ENST00000400109 1033 ntBASIC15.26■□□□□ 0.03
PHF1O43189 AL590627.1-203ENST00000421194 1026 ntBASIC15.26■□□□□ 0.03
PHF1O43189 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.26■□□□□ 0.03
PHF1O43189 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.26■□□□□ 0.03
PHF1O43189 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.26■□□□□ 0.03
PHF1O43189 AC009065.1-201ENST00000564055 1225 ntBASIC15.26■□□□□ 0.03
PHF1O43189 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.26■□□□□ 0.03
PHF1O43189 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.26■□□□□ 0.03
PHF1O43189 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.26■□□□□ 0.03
PHF1O43189 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.26■□□□□ 0.03
PHF1O43189 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PHF1O43189 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.26■□□□□ 0.03
PHF1O43189 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PHF1O43189 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PHF1O43189 FLJ13224-201ENST00000313737 1514 ntBASIC15.26■□□□□ 0.03
PHF1O43189 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.26■□□□□ 0.03
PHF1O43189 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.26■□□□□ 0.03
PHF1O43189 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 SIRPAP1-201ENST00000448467 1770 ntBASIC15.26■□□□□ 0.03
PHF1O43189 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.26■□□□□ 0.03
PHF1O43189 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.26■□□□□ 0.03
PHF1O43189 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PHF1O43189 AC012317.2-201ENST00000623305 2251 ntBASIC15.26■□□□□ 0.03
PHF1O43189 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.26■□□□□ 0.03
PHF1O43189 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PHF1O43189 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.25■□□□□ 0.03
PHF1O43189 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PHF1O43189 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.25■□□□□ 0.03
PHF1O43189 MYLKP1-201ENST00000509077 1580 ntBASIC15.25■□□□□ 0.03
PHF1O43189 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
PHF1O43189 MIR662-201ENST00000384847 95 ntBASIC15.25■□□□□ 0.03
PHF1O43189 MIR1233-2-201ENST00000408138 82 ntBASIC15.25■□□□□ 0.03
PHF1O43189 MIR1233-1-201ENST00000408722 82 ntBASIC15.25■□□□□ 0.03
PHF1O43189 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.25■□□□□ 0.03
PHF1O43189 LINC00265-3P-201ENST00000447588 903 ntBASIC15.25■□□□□ 0.03
PHF1O43189 AC092183.1-201ENST00000469884 875 ntBASIC15.25■□□□□ 0.03
PHF1O43189 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.25■□□□□ 0.03
PHF1O43189 KRT18P31-201ENST00000506277 1292 ntBASIC15.25■□□□□ 0.03
PHF1O43189 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.25■□□□□ 0.03
PHF1O43189 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.25■□□□□ 0.03
PHF1O43189 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.25■□□□□ 0.03
PHF1O43189 AL163051.1-201ENST00000569214 1512 ntBASIC15.25■□□□□ 0.03
PHF1O43189 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.25■□□□□ 0.03
PHF1O43189 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.25■□□□□ 0.03
PHF1O43189 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.25■□□□□ 0.03
PHF1O43189 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
PHF1O43189 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.25■□□□□ 0.03
PHF1O43189 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PHF1O43189 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PHF1O43189 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.24■□□□□ 0.03
PHF1O43189 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.24■□□□□ 0.03
PHF1O43189 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms