Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PHGDHO43175 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.55■□□□□ 0.4
PHGDHO43175 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PHGDHO43175 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PHGDHO43175 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PHGDHO43175 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.55■□□□□ 0.4
PHGDHO43175 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
PHGDHO43175 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 BX276092.7-203ENST00000637198 1536 ntBASIC17.54■□□□□ 0.4
PHGDHO43175 HBZP1-201ENST00000354915 429 ntBASIC17.54■□□□□ 0.4
PHGDHO43175 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.54■□□□□ 0.4
PHGDHO43175 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.54■□□□□ 0.4
PHGDHO43175 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.54■□□□□ 0.4
PHGDHO43175 MTCL1P1-201ENST00000446207 792 ntBASIC17.54■□□□□ 0.4
PHGDHO43175 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.54■□□□□ 0.4
PHGDHO43175 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.54■□□□□ 0.4
PHGDHO43175 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.54■□□□□ 0.4
PHGDHO43175 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PHGDHO43175 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PHGDHO43175 AC006011.2-201ENST00000621313 1158 ntBASIC17.54■□□□□ 0.4
PHGDHO43175 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PHGDHO43175 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PHGDHO43175 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.54■□□□□ 0.4
PHGDHO43175 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 LYSMD4-203ENST00000378904 2122 ntBASIC17.54■□□□□ 0.4
PHGDHO43175 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.54■□□□□ 0.4
PHGDHO43175 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHGDHO43175 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.54■□□□□ 0.4
PHGDHO43175 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.54■□□□□ 0.4
PHGDHO43175 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.53■□□□□ 0.4
PHGDHO43175 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.53■□□□□ 0.4
PHGDHO43175 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.53■□□□□ 0.4
PHGDHO43175 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.53■□□□□ 0.4
PHGDHO43175 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
PHGDHO43175 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PHGDHO43175 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PHGDHO43175 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 TSPY5P-201ENST00000426936 936 ntBASIC17.53■□□□□ 0.4
PHGDHO43175 AC112907.2-201ENST00000448639 330 ntBASIC17.53■□□□□ 0.4
PHGDHO43175 AC068472.1-201ENST00000474589 881 ntBASIC17.53■□□□□ 0.4
PHGDHO43175 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.53■□□□□ 0.4
PHGDHO43175 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.53■□□□□ 0.4
PHGDHO43175 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 GPR32P1-201ENST00000601788 811 ntBASIC17.53■□□□□ 0.4
PHGDHO43175 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 AC084018.2-201ENST00000613093 2607 ntBASIC17.53■□□□□ 0.4
PHGDHO43175 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PHGDHO43175 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.53■□□□□ 0.4
PHGDHO43175 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.53■□□□□ 0.4
PHGDHO43175 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.53■□□□□ 0.4
PHGDHO43175 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHGDHO43175 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PHGDHO43175 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PHGDHO43175 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PHGDHO43175 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PHGDHO43175 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHGDHO43175 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms