Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.84■□□□□ 0.61
SPTLC1O15269 IL9RP2-201ENST00000423948 1312 ntBASIC18.84■□□□□ 0.61
SPTLC1O15269 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SPTLC1O15269 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SPTLC1O15269 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.84■□□□□ 0.61
SPTLC1O15269 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.84■□□□□ 0.61
SPTLC1O15269 MTDHP4-201ENST00000600287 670 ntBASIC18.84■□□□□ 0.61
SPTLC1O15269 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SPTLC1O15269 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.84■□□□□ 0.61
SPTLC1O15269 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 AC006116.8-202ENST00000587620 1550 ntBASIC18.84■□□□□ 0.61
SPTLC1O15269 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SPTLC1O15269 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SPTLC1O15269 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
SPTLC1O15269 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPTLC1O15269 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPTLC1O15269 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SPTLC1O15269 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPTLC1O15269 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SPTLC1O15269 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SPTLC1O15269 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SPTLC1O15269 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.83■□□□□ 0.61
SPTLC1O15269 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.61
SPTLC1O15269 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
SPTLC1O15269 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.83■□□□□ 0.6
SPTLC1O15269 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.83■□□□□ 0.6
SPTLC1O15269 HCG11-201ENST00000411553 5696 ntBASIC18.83■□□□□ 0.6
SPTLC1O15269 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.83■□□□□ 0.6
SPTLC1O15269 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.83■□□□□ 0.6
SPTLC1O15269 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.83■□□□□ 0.6
SPTLC1O15269 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.83■□□□□ 0.6
SPTLC1O15269 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.83■□□□□ 0.6
SPTLC1O15269 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SPTLC1O15269 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.83■□□□□ 0.6
SPTLC1O15269 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 AC007613.1-201ENST00000572811 2597 ntBASIC18.83■□□□□ 0.6
SPTLC1O15269 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPTLC1O15269 SIGLEC16-201ENST00000599858 1437 ntBASIC18.83■□□□□ 0.6
SPTLC1O15269 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SPTLC1O15269 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPTLC1O15269 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPTLC1O15269 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPTLC1O15269 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.82■□□□□ 0.6
SPTLC1O15269 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.82■□□□□ 0.6
SPTLC1O15269 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SPTLC1O15269 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPTLC1O15269 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPTLC1O15269 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPTLC1O15269 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPTLC1O15269 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SPTLC1O15269 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SPTLC1O15269 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPTLC1O15269 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.82■□□□□ 0.6
SPTLC1O15269 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.82■□□□□ 0.6
SPTLC1O15269 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.82■□□□□ 0.6
SPTLC1O15269 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.82■□□□□ 0.6
SPTLC1O15269 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.82■□□□□ 0.6
SPTLC1O15269 AC012640.2-201ENST00000561606 901 ntBASIC18.82■□□□□ 0.6
SPTLC1O15269 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.82■□□□□ 0.6
SPTLC1O15269 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.82■□□□□ 0.6
SPTLC1O15269 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.82■□□□□ 0.6
SPTLC1O15269 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPTLC1O15269 NOC2LP1-202ENST00000452600 2235 ntBASIC18.82■□□□□ 0.6
SPTLC1O15269 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.82■□□□□ 0.6
SPTLC1O15269 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPTLC1O15269 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPTLC1O15269 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPTLC1O15269 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SPTLC1O15269 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPTLC1O15269 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPTLC1O15269 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SPTLC1O15269 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.81■□□□□ 0.6
SPTLC1O15269 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SPTLC1O15269 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.81■□□□□ 0.6
SPTLC1O15269 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPTLC1O15269 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms