Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC28A1O00337 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC28A1O00337 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC28A1O00337 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SLC28A1O00337 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC28A1O00337 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC28A1O00337 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC28A1O00337 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC28A1O00337 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SLC28A1O00337 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC28A1O00337 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC28A1O00337 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLC28A1O00337 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC28A1O00337 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.97■□□□□ 0.31
SLC28A1O00337 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC28A1O00337 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC28A1O00337 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC28A1O00337 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SLC28A1O00337 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SLC28A1O00337 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC28A1O00337 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC28A1O00337 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.97■□□□□ 0.31
SLC28A1O00337 AC005332.3-201ENST00000589904 676 ntBASIC16.97■□□□□ 0.31
SLC28A1O00337 AL139327.4-201ENST00000612362 153 ntBASIC16.97■□□□□ 0.31
SLC28A1O00337 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
SLC28A1O00337 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC28A1O00337 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC28A1O00337 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC28A1O00337 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A1O00337 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC28A1O00337 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A1O00337 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC28A1O00337 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A1O00337 AC005521.1-201ENST00000393351 872 ntBASIC16.96■□□□□ 0.31
SLC28A1O00337 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC28A1O00337 AC112907.2-201ENST00000448639 330 ntBASIC16.96■□□□□ 0.31
SLC28A1O00337 KRT18P38-201ENST00000449496 1282 ntBASIC16.96■□□□□ 0.31
SLC28A1O00337 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC28A1O00337 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A1O00337 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A1O00337 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC28A1O00337 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A1O00337 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A1O00337 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC28A1O00337 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC28A1O00337 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A1O00337 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC28A1O00337 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC28A1O00337 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SLC28A1O00337 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC28A1O00337 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC28A1O00337 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC28A1O00337 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.96■□□□□ 0.3
SLC28A1O00337 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC28A1O00337 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC28A1O00337 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC28A1O00337 AC097374.2-201ENST00000618617 1306 ntBASIC16.96■□□□□ 0.3
SLC28A1O00337 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SLC28A1O00337 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC28A1O00337 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLC28A1O00337 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 AC022211.2-201ENST00000585075 2527 ntBASIC16.95■□□□□ 0.3
SLC28A1O00337 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SLC28A1O00337 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SLC28A1O00337 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 AC002558.1-201ENST00000488906 803 ntBASIC16.95■□□□□ 0.3
SLC28A1O00337 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC28A1O00337 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC28A1O00337 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC28A1O00337 AL390719.2-201ENST00000606993 987 ntBASIC16.95■□□□□ 0.3
SLC28A1O00337 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC28A1O00337 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC28A1O00337 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms