Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AL356309.3-201ENST00000624132 1934 ntBASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 AP002469.2-201ENST00000531724 424 ntBASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 AC073592.4-201ENST00000623827 446 ntBASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YJEFN3A6XGL0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 SIGLEC16-201ENST00000599858 1437 ntBASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 AC003669.1-201ENST00000334569 611 ntBASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 KLF4P1-201ENST00000412782 1185 ntBASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 AC009078.2-202ENST00000463353 338 ntBASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
YJEFN3A6XGL0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
YJEFN3A6XGL0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
YJEFN3A6XGL0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
YJEFN3A6XGL0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
YJEFN3A6XGL0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.33■□□□□ 0.53
YJEFN3A6XGL0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
YJEFN3A6XGL0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
YJEFN3A6XGL0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 MYCLP1-201ENST00000372451 1075 ntBASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 FAM197Y8-203ENST00000450145 560 ntBASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 BX005266.1-201ENST00000473402 457 ntBASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 AL139288.1-201ENST00000623748 933 ntBASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
YJEFN3A6XGL0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
YJEFN3A6XGL0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms