Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PALM3A6NDB9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.31■□□□□ 0.84
PALM3A6NDB9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.31■□□□□ 0.84
PALM3A6NDB9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.31■□□□□ 0.84
PALM3A6NDB9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PALM3A6NDB9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PALM3A6NDB9 AF186996.4-201ENST00000467186 377 ntBASIC20.31■□□□□ 0.84
PALM3A6NDB9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.31■□□□□ 0.84
PALM3A6NDB9 AC073648.2-201ENST00000510116 352 ntBASIC20.31■□□□□ 0.84
PALM3A6NDB9 AL662844.1-201ENST00000546340 181 ntBASIC20.31■□□□□ 0.84
PALM3A6NDB9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.31■□□□□ 0.84
PALM3A6NDB9 AC064862.7-201ENST00000604520 867 ntBASIC20.31■□□□□ 0.84
PALM3A6NDB9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PALM3A6NDB9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PALM3A6NDB9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PALM3A6NDB9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PALM3A6NDB9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
PALM3A6NDB9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PALM3A6NDB9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PALM3A6NDB9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PALM3A6NDB9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.31■□□□□ 0.84
PALM3A6NDB9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.31■□□□□ 0.84
PALM3A6NDB9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PALM3A6NDB9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PALM3A6NDB9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
PALM3A6NDB9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.3■□□□□ 0.84
PALM3A6NDB9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.3■□□□□ 0.84
PALM3A6NDB9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PALM3A6NDB9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PALM3A6NDB9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PALM3A6NDB9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PALM3A6NDB9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PALM3A6NDB9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.3■□□□□ 0.84
PALM3A6NDB9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.3■□□□□ 0.84
PALM3A6NDB9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.3■□□□□ 0.84
PALM3A6NDB9 AL773604.1-201ENST00000617417 272 ntBASIC20.3■□□□□ 0.84
PALM3A6NDB9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PALM3A6NDB9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PALM3A6NDB9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PALM3A6NDB9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PALM3A6NDB9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.3■□□□□ 0.84
PALM3A6NDB9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PALM3A6NDB9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PALM3A6NDB9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PALM3A6NDB9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 RPS2P1-201ENST00000434010 821 ntBASIC20.29■□□□□ 0.84
PALM3A6NDB9 SIGLEC30P-201ENST00000455569 941 ntBASIC20.29■□□□□ 0.84
PALM3A6NDB9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 LYSMD4-203ENST00000378904 2122 ntBASIC20.29■□□□□ 0.84
PALM3A6NDB9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.29■□□□□ 0.84
PALM3A6NDB9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PALM3A6NDB9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PALM3A6NDB9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PALM3A6NDB9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PALM3A6NDB9 AL031284.1-201ENST00000419297 478 ntBASIC20.28■□□□□ 0.84
PALM3A6NDB9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PALM3A6NDB9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.28■□□□□ 0.84
PALM3A6NDB9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms