Protein–RNA interactions for Protein: A2RUT3

TMEM89, Transmembrane protein 89, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM89A2RUT3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
TMEM89A2RUT3 KRT18P55-202ENST00000578578 1546 ntBASIC13.95□□□□□ -0.18
TMEM89A2RUT3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 DDX43P3-201ENST00000441064 443 ntBASIC13.94□□□□□ -0.18
TMEM89A2RUT3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 AC018845.2-201ENST00000568326 409 ntBASIC13.94□□□□□ -0.18
TMEM89A2RUT3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
TMEM89A2RUT3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 GPR89P-201ENST00000407924 1495 ntBASIC13.93□□□□□ -0.18
TMEM89A2RUT3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 AC004817.3-201ENST00000602957 2129 ntBASIC13.93□□□□□ -0.18
TMEM89A2RUT3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 TSEN15P1-201ENST00000423257 515 ntBASIC13.93□□□□□ -0.18
TMEM89A2RUT3 AC103564.2-201ENST00000432853 1299 ntBASIC13.93□□□□□ -0.18
TMEM89A2RUT3 ACTG1P14-201ENST00000446382 1122 ntBASIC13.93□□□□□ -0.18
TMEM89A2RUT3 AC108073.2-201ENST00000464002 357 ntBASIC13.93□□□□□ -0.18
TMEM89A2RUT3 IGHV3-65-201ENST00000523210 341 ntBASIC13.93□□□□□ -0.18
TMEM89A2RUT3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 AC027612.4-201ENST00000605371 583 ntBASIC13.93□□□□□ -0.18
TMEM89A2RUT3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM89A2RUT3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms