Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC163A0A0D9SF12 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 Z92544.3-201ENST00000624747 417 ntBASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 AL031598.1-201ENST00000561511 1773 ntBASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC163A0A0D9SF12 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 PMS2P4-201ENST00000412466 1052 ntBASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 AL627223.1-201ENST00000416693 442 ntBASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 AC026120.1-201ENST00000611536 926 ntBASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 AC006116.8-202ENST00000587620 1550 ntBASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC163A0A0D9SF12 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 AC129492.6-201ENST00000611383 1305 ntBASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC163A0A0D9SF12 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 AC126763.1-201ENST00000552015 2118 ntBASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 AL513480.1-201ENST00000451731 511 ntBASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.3■□□□□ 0.36
CCDC163A0A0D9SF12 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms