Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 AL603756.1-201ENST00000606511 2163 ntBASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-7A0A0A0MS04 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC034232.1-201ENST00000506026 1064 ntBASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC024563.2-201ENST00000603282 481 ntBASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV6-7A0A0A0MS04 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 KRT8P47-201ENST00000604727 1398 ntBASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV6-7A0A0A0MS04 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms