Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 AC009949.1-201ENST00000623048 1830 ntBASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV1A0A0A0MS02 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 AC106820.2-201ENST00000563775 3264 ntBASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 AL645929.1-201ENST00000420084 975 ntBASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 AL049597.2-201ENST00000565575 961 ntBASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 HYMAI.1-201ENST00000620949 238 ntBASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV1A0A0A0MS02 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 AL355312.1-201ENST00000407115 2176 ntBASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRGV1A0A0A0MS02 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms