Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 HBZP1-201ENST00000354915 429 ntBASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 MIR662-201ENST00000384847 95 ntBASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 AC112907.2-201ENST00000448639 330 ntBASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 VENTXP5-201ENST00000523979 775 ntBASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV27A0A087WT01 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 RNF152P1-201ENST00000397754 604 ntBASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 TSPY5P-201ENST00000426936 936 ntBASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 MTCL1P1-201ENST00000446207 792 ntBASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 GPR32P1-201ENST00000601788 811 ntBASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 AC006011.2-201ENST00000621313 1158 ntBASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 LYSMD4-203ENST00000378904 2122 ntBASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV27A0A087WT01 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms