Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 AL645608.8-201ENST00000606034 2086 ntBASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 AL136038.3-201ENST00000561909 1096 ntBASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 AC005332.3-201ENST00000589904 676 ntBASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 AC116407.2-201ENST00000613639 860 ntBASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 AL121956.5-201ENST00000625261 221 ntBASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 AD000864.1-201ENST00000624076 2295 ntBASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB4X5D2U9 Z83836.1-201ENST00000624605 1642 ntBASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 NTF6B-201ENST00000591913 560 ntBASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB4X5D2U9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DRB4X5D2U9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DRB4X5D2U9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
HLA-DRB4X5D2U9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
HLA-DRB4X5D2U9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DRB4X5D2U9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DRB4X5D2U9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DRB4X5D2U9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DRB4X5D2U9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.3□□□□□ -0.28
HLA-DRB4X5D2U9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms