Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 AP002414.1-201ENST00000391405 1147 ntBASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 KRT19P2-202ENST00000557173 1012 ntBASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 SPCS2P1-201ENST00000561636 679 ntBASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 AC010507.1-201ENST00000633895 436 ntBASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 AC007064.4-201ENST00000637740 555 ntBASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 BCAR1-209ENST00000546196 1340 ntBASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA1Q9Y5H4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 ANO7L1-203ENST00000602586 1720 ntBASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 DDX43P3-201ENST00000441064 443 ntBASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 AC074386.1-202ENST00000463561 864 ntBASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 AC004835.2-201ENST00000603762 682 ntBASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA1Q9Y5H4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 AP000974.1-201ENST00000623909 2387 ntBASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 FAM58CP-201ENST00000435741 640 ntBASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA1Q9Y5H4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms