Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 COA4-204ENST00000541455 1038 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGA4Q9Y5G9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 AC010740.1-201ENST00000417035 684 ntBASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 AC008687.5-201ENST00000593746 558 ntBASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 AC024563.2-201ENST00000603282 481 ntBASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 AL121912.1-201ENST00000603683 238 ntBASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA4Q9Y5G9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
PCDHGA4Q9Y5G9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.46■□□□□ 0.38
PCDHGA4Q9Y5G9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA4Q9Y5G9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms