Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 REXO1L9P-201ENST00000604264 2108 ntBASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 AC120114.3-201ENST00000611923 658 ntBASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 AC012317.2-201ENST00000623305 2251 ntBASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 SDHAP2-201ENST00000455183 2001 ntBASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGA6Q9Y5G7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 AL645608.8-201ENST00000606034 2086 ntBASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 AF186996.4-201ENST00000467186 377 ntBASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 AC009533.2-201ENST00000543664 586 ntBASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 AC005336.2-201ENST00000593183 939 ntBASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 AC009154.2-201ENST00000621177 724 ntBASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGA6Q9Y5G7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 AL024508.2-201ENST00000607749 1894 ntBASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 RBM17P3-201ENST00000417687 1192 ntBASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 AC132008.2-207ENST00000454517 770 ntBASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 GPALPP1-207ENST00000611650 899 ntBASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA6Q9Y5G7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms