Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 IGHV3-47-201ENST00000425060 335 ntBASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 KRT18P31-201ENST00000506277 1292 ntBASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 IFNL4P1-201ENST00000607083 540 ntBASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 AL353801.3-201ENST00000609898 542 ntBASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGB6Q9Y5F9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGB6Q9Y5F9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGB6Q9Y5F9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGB6Q9Y5F9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 UNC93B7-201ENST00000509439 705 ntBASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 AC074051.2-201ENST00000565115 352 ntBASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 AC124864.1-201ENST00000623408 392 ntBASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGB6Q9Y5F9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 GMCL1P1-201ENST00000463439 1581 ntBASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 PKD1P1-201ENST00000458669 6805 ntBASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 AL845331.1-201ENST00000424978 1190 ntBASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 FDX1P1-201ENST00000449115 551 ntBASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDHGB6Q9Y5F9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHGB6Q9Y5F9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms