Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 AL049757.1-201ENST00000616842 1596 ntBASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 AC103564.2-201ENST00000432853 1299 ntBASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 AC109462.3-201ENST00000573934 613 ntBASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 LINC01711-201ENST00000598340 967 ntBASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 AC019129.2-201ENST00000609837 1235 ntBASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 LINC00304-203ENST00000565008 1864 ntBASIC17.8■□□□□ 0.44
PCDHGC4Q9Y5F7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 KRT8P10-201ENST00000450021 1447 ntBASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGC4Q9Y5F7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 AC111152.3-201ENST00000569699 673 ntBASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 AP001269.4-201ENST00000609611 512 ntBASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDHGC4Q9Y5F7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms