Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 KLF4P1-201ENST00000412782 1185 ntBASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 AC005593.1-201ENST00000624894 515 ntBASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 BX276092.7-203ENST00000637198 1536 ntBASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 REXO1L9P-201ENST00000604264 2108 ntBASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 TNXA-203ENST00000507684 2038 ntBASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTDP1Q9Y5B0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 IGHV3-52-201ENST00000519770 353 ntBASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 SIGLEC16-201ENST00000599858 1437 ntBASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.35■□□□□ 0.85
CTDP1Q9Y5B0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 PRYP5-201ENST00000451909 266 ntBASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 AC109462.3-201ENST00000573934 613 ntBASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 AL356488.2-201ENST00000602755 427 ntBASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 AC073592.4-201ENST00000623827 446 ntBASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 PGM5P2-202ENST00000637225 1043 ntBASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CTDP1Q9Y5B0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CTDP1Q9Y5B0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTDP1Q9Y5B0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTDP1Q9Y5B0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTDP1Q9Y5B0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTDP1Q9Y5B0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CTDP1Q9Y5B0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTDP1Q9Y5B0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CTDP1Q9Y5B0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTDP1Q9Y5B0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTDP1Q9Y5B0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTDP1Q9Y5B0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTDP1Q9Y5B0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms