Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 AC113347.1-201ENST00000413321 391 ntBASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 BX664615.1-201ENST00000443558 458 ntBASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 AC034232.1-201ENST00000506026 1064 ntBASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 AC010203.1-204ENST00000548782 407 ntBASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 FLJ38576-201ENST00000623820 2459 ntBASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 SDHAP2-201ENST00000455183 2001 ntBASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HHLA3Q9XRX5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 PCDHA1-201ENST00000378133 2726 ntBASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 SEC1P-202ENST00000473944 940 ntBASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 COX11P1-201ENST00000489116 835 ntBASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HHLA3Q9XRX5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HHLA3Q9XRX5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms