Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.73■□□□□ 0.91
SMC3Q9UQE7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 NKILA-202ENST00000614771 2598 ntBASIC20.72■□□□□ 0.91
SMC3Q9UQE7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.72■□□□□ 0.91
SMC3Q9UQE7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 AC084018.2-201ENST00000613093 2607 ntBASIC20.72■□□□□ 0.91
SMC3Q9UQE7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMC3Q9UQE7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 LYSMD4-203ENST00000378904 2122 ntBASIC20.71■□□□□ 0.91
SMC3Q9UQE7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 IGHGP-201ENST00000390555 1178 ntBASIC20.71■□□□□ 0.91
SMC3Q9UQE7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 AP003733.1-201ENST00000491725 852 ntBASIC20.71■□□□□ 0.91
SMC3Q9UQE7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 AC139887.4-201ENST00000607877 719 ntBASIC20.71■□□□□ 0.91
SMC3Q9UQE7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMC3Q9UQE7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SMC3Q9UQE7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 AC011676.5-201ENST00000624864 2660 ntBASIC20.7■□□□□ 0.9
SMC3Q9UQE7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 ZNF444P1-201ENST00000559497 298 ntBASIC20.7■□□□□ 0.9
SMC3Q9UQE7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms