Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 TSPY14P-201ENST00000303979 915 ntBASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 NEK4P2-201ENST00000580004 1012 ntBASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 AP000525.1-201ENST00000608286 694 ntBASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 AC060834.1-201ENST00000443027 2032 ntBASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SAMD4AQ9UPU9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 AC005104.2-201ENST00000427818 678 ntBASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 AC128688.1-201ENST00000487626 519 ntBASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SAMD4AQ9UPU9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 PRORSD1P-201ENST00000295112 541 ntBASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 AL390955.1-201ENST00000428694 934 ntBASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 AL158047.1-201ENST00000445918 881 ntBASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 EGLN1P1-201ENST00000531623 762 ntBASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 LINC01311-201ENST00000565162 1445 ntBASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 MIR4785-201ENST00000585005 73 ntBASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.49■□□□□ 0.23
SAMD4AQ9UPU9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms