Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.59■□□□□ 0.57
PCDHGC3Q9UN70 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHGC3Q9UN70 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGC3Q9UN70 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGC3Q9UN70 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGC3Q9UN70 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHGC3Q9UN70 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHGC3Q9UN70 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGC3Q9UN70 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHGC3Q9UN70 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDHGC3Q9UN70 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGC3Q9UN70 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGC3Q9UN70 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 HCG4P8-203ENST00000443049 980 ntBASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 NUS1P1-201ENST00000446295 882 ntBASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 MIR5100-201ENST00000579544 119 ntBASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 AC108860.2-201ENST00000562760 2183 ntBASIC18.57■□□□□ 0.56
PCDHGC3Q9UN70 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 AC132938.5-201ENST00000624980 1813 ntBASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 KRT16P4-201ENST00000453883 522 ntBASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 AP000867.4-201ENST00000641616 219 ntBASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGC3Q9UN70 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 PMPCAP1-201ENST00000508114 1576 ntBASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms