Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNPO2Q9UMS6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 MRPL20P1-201ENST00000400819 433 ntBASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 AC002347.1-201ENST00000569543 541 ntBASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 AC133963.1-201ENST00000504166 1679 ntBASIC20.19■□□□□ 0.82
SYNPO2Q9UMS6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 AC007967.2-201ENST00000432613 625 ntBASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 DNAJB3-201ENST00000446806 729 ntBASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 AC139530.3-201ENST00000620344 690 ntBASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNPO2Q9UMS6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 AC092865.5-201ENST00000545435 363 ntBASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 AC004790.2-201ENST00000623588 572 ntBASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNPO2Q9UMS6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPO2Q9UMS6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms