Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TSR3Q9UJK0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSR3Q9UJK0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSR3Q9UJK0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TSR3Q9UJK0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TSR3Q9UJK0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TSR3Q9UJK0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TSR3Q9UJK0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 PCED1CP-201ENST00000419887 785 ntBASIC17.56■□□□□ 0.4
TSR3Q9UJK0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 AL136038.3-201ENST00000561909 1096 ntBASIC17.56■□□□□ 0.4
TSR3Q9UJK0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 AC006213.4-201ENST00000616184 634 ntBASIC17.56■□□□□ 0.4
TSR3Q9UJK0 AC124864.1-201ENST00000623408 392 ntBASIC17.56■□□□□ 0.4
TSR3Q9UJK0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 AL358472.4-201ENST00000633140 710 ntBASIC17.56■□□□□ 0.4
TSR3Q9UJK0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.56■□□□□ 0.4
TSR3Q9UJK0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 MTCL1P1-201ENST00000446207 792 ntBASIC17.55■□□□□ 0.4
TSR3Q9UJK0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 IGHV3-41-201ENST00000613121 348 ntBASIC17.55■□□□□ 0.4
TSR3Q9UJK0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSR3Q9UJK0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 IER3-202ENST00000376377 1350 ntBASIC17.54■□□□□ 0.4
TSR3Q9UJK0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.54■□□□□ 0.4
TSR3Q9UJK0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms