Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRFN1Q9P244 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRFN1Q9P244 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.19■□□□□ 0.18
LRFN1Q9P244 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRFN1Q9P244 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRFN1Q9P244 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRFN1Q9P244 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.19■□□□□ 0.18
LRFN1Q9P244 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRFN1Q9P244 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LRFN1Q9P244 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 AC104581.1-202ENST00000635932 2618 ntBASIC16.18■□□□□ 0.18
LRFN1Q9P244 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 RPL13AP23-201ENST00000480739 586 ntBASIC16.18■□□□□ 0.18
LRFN1Q9P244 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 AC073592.5-201ENST00000624854 528 ntBASIC16.18■□□□□ 0.18
LRFN1Q9P244 AL022326.1-202ENST00000641533 845 ntBASIC16.18■□□□□ 0.18
LRFN1Q9P244 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 AP000997.3-201ENST00000623333 2250 ntBASIC16.18■□□□□ 0.18
LRFN1Q9P244 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.18■□□□□ 0.18
LRFN1Q9P244 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRFN1Q9P244 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.17■□□□□ 0.18
LRFN1Q9P244 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRFN1Q9P244 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 AC009949.1-201ENST00000623048 1830 ntBASIC16.17■□□□□ 0.18
LRFN1Q9P244 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.17■□□□□ 0.18
LRFN1Q9P244 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.17■□□□□ 0.18
LRFN1Q9P244 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRFN1Q9P244 PMS2P1-201ENST00000431037 1228 ntBASIC16.17■□□□□ 0.18
LRFN1Q9P244 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRFN1Q9P244 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.17■□□□□ 0.18
LRFN1Q9P244 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.17■□□□□ 0.18
LRFN1Q9P244 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 GPALPP1-207ENST00000611650 899 ntBASIC16.17■□□□□ 0.18
LRFN1Q9P244 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 BX276092.7-203ENST00000637198 1536 ntBASIC16.17■□□□□ 0.18
LRFN1Q9P244 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.17■□□□□ 0.18
LRFN1Q9P244 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRFN1Q9P244 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 ZNF259P1-201ENST00000407656 1365 ntBASIC16.16■□□□□ 0.18
LRFN1Q9P244 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN1Q9P244 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.16■□□□□ 0.18
LRFN1Q9P244 MIR574-201ENST00000385209 96 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms