Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH4Q9P003 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH4Q9P003 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH4Q9P003 KRT17P6-201ENST00000453795 1220 ntBASIC16.52■□□□□ 0.24
CNIH4Q9P003 AC068472.1-201ENST00000474589 881 ntBASIC16.52■□□□□ 0.24
CNIH4Q9P003 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.52■□□□□ 0.24
CNIH4Q9P003 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.52■□□□□ 0.24
CNIH4Q9P003 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH4Q9P003 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.52■□□□□ 0.24
CNIH4Q9P003 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.52■□□□□ 0.24
CNIH4Q9P003 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.52■□□□□ 0.24
CNIH4Q9P003 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.52■□□□□ 0.24
CNIH4Q9P003 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH4Q9P003 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CNIH4Q9P003 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.52■□□□□ 0.24
CNIH4Q9P003 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH4Q9P003 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.52■□□□□ 0.23
CNIH4Q9P003 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.52■□□□□ 0.23
CNIH4Q9P003 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CNIH4Q9P003 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CNIH4Q9P003 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CNIH4Q9P003 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.51■□□□□ 0.23
CNIH4Q9P003 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.51■□□□□ 0.23
CNIH4Q9P003 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CNIH4Q9P003 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.51■□□□□ 0.23
CNIH4Q9P003 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CNIH4Q9P003 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CNIH4Q9P003 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CNIH4Q9P003 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.51■□□□□ 0.23
CNIH4Q9P003 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CNIH4Q9P003 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CNIH4Q9P003 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH4Q9P003 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 AC108860.2-201ENST00000562760 2183 ntBASIC16.5■□□□□ 0.23
CNIH4Q9P003 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 MTCL1P1-201ENST00000446207 792 ntBASIC16.5■□□□□ 0.23
CNIH4Q9P003 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 AC074051.2-201ENST00000565115 352 ntBASIC16.5■□□□□ 0.23
CNIH4Q9P003 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 AC141586.5-201ENST00000624546 2050 ntBASIC16.5■□□□□ 0.23
CNIH4Q9P003 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CNIH4Q9P003 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNIH4Q9P003 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms