Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VSX1Q9NZR4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 SPDYE13P-201ENST00000445314 798 ntBASIC15.77■□□□□ 0.12
VSX1Q9NZR4 AC104076.2-201ENST00000448912 469 ntBASIC15.77■□□□□ 0.12
VSX1Q9NZR4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
VSX1Q9NZR4 CROCCP1-201ENST00000426910 5675 ntBASIC15.77■□□□□ 0.12
VSX1Q9NZR4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VSX1Q9NZR4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 RNF126P1-202ENST00000569893 925 ntBASIC15.76■□□□□ 0.11
VSX1Q9NZR4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VSX1Q9NZR4 Z83836.1-201ENST00000624605 1642 ntBASIC15.76■□□□□ 0.11
VSX1Q9NZR4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.75■□□□□ 0.11
VSX1Q9NZR4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VSX1Q9NZR4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VSX1Q9NZR4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VSX1Q9NZR4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
VSX1Q9NZR4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VSX1Q9NZR4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.75■□□□□ 0.11
VSX1Q9NZR4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VSX1Q9NZR4 AC097374.2-201ENST00000618617 1306 ntBASIC15.75■□□□□ 0.11
VSX1Q9NZR4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms