Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 WWOX-216ENST00000569818 525 ntBASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 AC132938.6-201ENST00000623828 1655 ntBASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTLC3Q9NUV7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 GCSHP5-201ENST00000443090 522 ntBASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 UBE2SP1-201ENST00000450587 669 ntBASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 AP003071.4-201ENST00000562276 1284 ntBASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.42■□□□□ 0.7
SPTLC3Q9NUV7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 SLC25A1P2-201ENST00000430693 912 ntBASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 AC104390.1-201ENST00000555663 520 ntBASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 AP001412.1-201ENST00000608405 714 ntBASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 AC112497.1-201ENST00000624824 639 ntBASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.41■□□□□ 0.7
SPTLC3Q9NUV7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SPTLC3Q9NUV7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms