Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 IGHGP-201ENST00000390555 1178 ntBASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 KRT18P48-201ENST00000434763 852 ntBASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 AL023973.1-201ENST00000624619 620 ntBASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 AC010460.3-201ENST00000511359 1579 ntBASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 AC097374.2-201ENST00000618617 1306 ntBASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SLC52A3Q9NQ40 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 AL603756.1-201ENST00000606511 2163 ntBASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 COX5BP2-201ENST00000392354 334 ntBASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SLC52A3Q9NQ40 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 LINC01568-207ENST00000641790 1380 ntBASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 SPDYE15P-201ENST00000424157 909 ntBASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SLC52A3Q9NQ40 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms