Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 AC093909.1-201ENST00000504731 1122 ntBASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP6V0A4Q9HBG4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 IL9RP2-201ENST00000423948 1312 ntBASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 AC103564.2-201ENST00000432853 1299 ntBASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 AL355877.3-201ENST00000622820 899 ntBASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 SIRPAP1-201ENST00000448467 1770 ntBASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP6V0A4Q9HBG4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 GPALPP1-207ENST00000611650 899 ntBASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 AC148477.8-201ENST00000624298 468 ntBASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 AF228730.7-201ENST00000641842 219 ntBASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 AP005117.1-201ENST00000584346 1413 ntBASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP6V0A4Q9HBG4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V0A4Q9HBG4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP6V0A4Q9HBG4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V0A4Q9HBG4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V0A4Q9HBG4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
ATP6V0A4Q9HBG4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V0A4Q9HBG4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms