Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19■□□□□ 0.63
NXF3Q9H4D5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
NXF3Q9H4D5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NXF3Q9H4D5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 AC136632.2-201ENST00000512891 861 ntBASIC18.99■□□□□ 0.63
NXF3Q9H4D5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 TERC-201ENST00000602385 541 ntBASIC18.99■□□□□ 0.63
NXF3Q9H4D5 MIR1199-201ENST00000621445 119 ntBASIC18.99■□□□□ 0.63
NXF3Q9H4D5 AC004706.3-202ENST00000621574 984 ntBASIC18.99■□□□□ 0.63
NXF3Q9H4D5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 NCF1C-201ENST00000438382 1427 ntBASIC18.99■□□□□ 0.63
NXF3Q9H4D5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.99■□□□□ 0.63
NXF3Q9H4D5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 AC006504.4-201ENST00000592118 1568 ntBASIC18.98■□□□□ 0.63
NXF3Q9H4D5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 NEFHP1-201ENST00000412845 2629 ntBASIC18.98■□□□□ 0.63
NXF3Q9H4D5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 AC009947.1-201ENST00000444350 727 ntBASIC18.98■□□□□ 0.63
NXF3Q9H4D5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 AC140113.2-201ENST00000604370 208 ntBASIC18.98■□□□□ 0.63
NXF3Q9H4D5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
NXF3Q9H4D5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 AC012317.2-201ENST00000623305 2251 ntBASIC18.97■□□□□ 0.63
NXF3Q9H4D5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NXF3Q9H4D5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms