Protein–RNA interactions for Protein: Q9H2J4

PDCL3, Phosducin-like protein 3, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3Q9H2J4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PDCL3Q9H2J4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDCL3Q9H2J4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 C8orf49-201ENST00000525043 1968 ntBASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 FITM1-202ENST00000559294 800 ntBASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 AC007950.2-201ENST00000615045 2347 ntBASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.88■□□□□ 0.77
PDCL3Q9H2J4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 AC099063.4-201ENST00000641099 1602 ntBASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 AC112777.1-201ENST00000540175 1423 ntBASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 SLC25A1P2-201ENST00000430693 912 ntBASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 CCR12P-201ENST00000446203 998 ntBASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 AC093827.2-201ENST00000512654 315 ntBASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 C2orf69P3-201ENST00000565542 1120 ntBASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDCL3Q9H2J4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 TSPY17P-201ENST00000450329 467 ntBASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 TSPY26P-202ENST00000565928 3884 ntBASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.86■□□□□ 0.77
PDCL3Q9H2J4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDCL3Q9H2J4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDCL3Q9H2J4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDCL3Q9H2J4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PDCL3Q9H2J4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDCL3Q9H2J4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDCL3Q9H2J4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.85■□□□□ 0.77
PDCL3Q9H2J4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDCL3Q9H2J4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms