Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS11Q9H270 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS11Q9H270 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS11Q9H270 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS11Q9H270 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS11Q9H270 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.77■□□□□ 0.43
VPS11Q9H270 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
VPS11Q9H270 AC018695.7-201ENST00000624587 2492 ntBASIC17.77■□□□□ 0.43
VPS11Q9H270 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS11Q9H270 AGGF1P2-201ENST00000426656 2106 ntBASIC17.77■□□□□ 0.43
VPS11Q9H270 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
VPS11Q9H270 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VPS11Q9H270 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
VPS11Q9H270 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VPS11Q9H270 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
VPS11Q9H270 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS11Q9H270 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 MMP23A-201ENST00000234610 1017 ntBASIC17.76■□□□□ 0.43
VPS11Q9H270 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
VPS11Q9H270 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VPS11Q9H270 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.76■□□□□ 0.43
VPS11Q9H270 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
VPS11Q9H270 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS11Q9H270 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.76■□□□□ 0.43
VPS11Q9H270 TMEM191A-211ENST00000637163 1067 ntBASIC17.76■□□□□ 0.43
VPS11Q9H270 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.76■□□□□ 0.43
VPS11Q9H270 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
VPS11Q9H270 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.76■□□□□ 0.43
VPS11Q9H270 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
VPS11Q9H270 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
VPS11Q9H270 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS11Q9H270 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.76■□□□□ 0.43
VPS11Q9H270 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS11Q9H270 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS11Q9H270 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VPS11Q9H270 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS11Q9H270 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS11Q9H270 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS11Q9H270 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS11Q9H270 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VPS11Q9H270 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
VPS11Q9H270 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.75■□□□□ 0.43
VPS11Q9H270 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS11Q9H270 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS11Q9H270 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS11Q9H270 MIR4497-201ENST00000583208 89 ntBASIC17.75■□□□□ 0.43
VPS11Q9H270 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS11Q9H270 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS11Q9H270 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.75■□□□□ 0.43
VPS11Q9H270 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS11Q9H270 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.75■□□□□ 0.43
VPS11Q9H270 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS11Q9H270 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS11Q9H270 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VPS11Q9H270 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS11Q9H270 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VPS11Q9H270 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS11Q9H270 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS11Q9H270 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS11Q9H270 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VPS11Q9H270 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS11Q9H270 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VPS11Q9H270 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VPS11Q9H270 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
VPS11Q9H270 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VPS11Q9H270 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
VPS11Q9H270 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
VPS11Q9H270 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VPS11Q9H270 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS11Q9H270 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
VPS11Q9H270 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VPS11Q9H270 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS11Q9H270 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS11Q9H270 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VPS11Q9H270 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS11Q9H270 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS11Q9H270 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms