Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 AL391807.1-203ENST00000604392 2365 ntBASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
POLR2J3Q9H1A7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
POLR2J3Q9H1A7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
POLR2J3Q9H1A7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
POLR2J3Q9H1A7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
POLR2J3Q9H1A7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
POLR2J3Q9H1A7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
POLR2J3Q9H1A7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 KRT18P48-201ENST00000434763 852 ntBASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 SLC25A3P1-201ENST00000443844 931 ntBASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR2J3Q9H1A7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 FAM8A6P-201ENST00000407496 1135 ntBASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 HLA-F-220ENST00000434407 884 ntBASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 AC009949.1-201ENST00000623048 1830 ntBASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 BX276092.7-203ENST00000637198 1536 ntBASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR2J3Q9H1A7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 KRT8P47-201ENST00000604727 1398 ntBASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 LIN28AP1-201ENST00000429574 405 ntBASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 COX11P1-201ENST00000489116 835 ntBASIC16.31■□□□□ 0.2
POLR2J3Q9H1A7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms