Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 AC124283.5-201ENST00000624661 1809 ntBASIC14.31□□□□□ -0.12
NKX6-2Q9C056 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX6-2Q9C056 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 AC093787.1-201ENST00000450396 207 ntBASIC14.3□□□□□ -0.12
NKX6-2Q9C056 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.3□□□□□ -0.12
NKX6-2Q9C056 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 AC133552.2-202ENST00000575694 574 ntBASIC14.3□□□□□ -0.12
NKX6-2Q9C056 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 AL121829.2-201ENST00000620908 328 ntBASIC14.3□□□□□ -0.12
NKX6-2Q9C056 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.3□□□□□ -0.12
NKX6-2Q9C056 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 CICP13-201ENST00000422015 2789 ntBASIC14.3□□□□□ -0.12
NKX6-2Q9C056 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX6-2Q9C056 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms