Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 AC128714.1-201ENST00000637035 887 ntBASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 MIR346-201ENST00000362234 95 ntBASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL25A1Q9BXS0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 AC007551.1-201ENST00000457394 519 ntBASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 RNA5SP412-201ENST00000516234 123 ntBASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 SPCS2P2-201ENST00000603270 608 ntBASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 AC018529.1-201ENST00000613063 361 ntBASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.61■□□□□ 0.41
COL25A1Q9BXS0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 RPS2P36-201ENST00000456516 831 ntBASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.6■□□□□ 0.41
COL25A1Q9BXS0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms