Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 RBM17P3-201ENST00000417687 1192 ntBASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 AF238378.1-201ENST00000526806 358 ntBASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SSBP3Q9BWW4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 AC012313.1-201ENST00000593393 3059 ntBASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SSBP3Q9BWW4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 ABCD1P5-201ENST00000445663 754 ntBASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 AC106795.1-205ENST00000512851 1056 ntBASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSBP3Q9BWW4 AP002469.2-201ENST00000531724 424 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms