Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 AC005521.1-201ENST00000393351 872 ntBASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 AC034232.1-201ENST00000506026 1064 ntBASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 AC139887.4-201ENST00000607877 719 ntBASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 AC011558.1-201ENST00000623459 338 ntBASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 AL031432.5-201ENST00000641059 760 ntBASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 AC073508.3-201ENST00000619697 1419 ntBASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHRDL1Q9BU40 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 BX664615.1-201ENST00000443558 458 ntBASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 KRT18P57-201ENST00000443599 1254 ntBASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 RASA4DP-201ENST00000460726 1199 ntBASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 PCDHA12-202ENST00000613593 2588 ntBASIC14.04□□□□□ -0.16
CHRDL1Q9BU40 AC084018.2-201ENST00000613093 2607 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms