Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK3BQ9BT76 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 DUTP2-201ENST00000519164 463 ntBASIC12.3□□□□□ -0.44
UPK3BQ9BT76 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 RN7SL510P-201ENST00000581311 263 ntBASIC12.3□□□□□ -0.44
UPK3BQ9BT76 BNIP3P18-201ENST00000593976 575 ntBASIC12.3□□□□□ -0.44
UPK3BQ9BT76 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 NOC2LP2-201ENST00000407594 1944 ntBASIC12.3□□□□□ -0.44
UPK3BQ9BT76 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 AC022898.2-201ENST00000616822 1312 ntBASIC12.3□□□□□ -0.44
UPK3BQ9BT76 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
UPK3BQ9BT76 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AC091607.1-201ENST00000490318 1060 ntBASIC12.29□□□□□ -0.44
UPK3BQ9BT76 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AC112698.1-201ENST00000510299 916 ntBASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AL138831.2-201ENST00000606564 490 ntBASIC12.29□□□□□ -0.44
UPK3BQ9BT76 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AC099343.3-201ENST00000605834 2503 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms