Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.6□□□□□ -0.07
S1PR3Q99500 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.6□□□□□ -0.07
S1PR3Q99500 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.6□□□□□ -0.07
S1PR3Q99500 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.6□□□□□ -0.07
S1PR3Q99500 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 AL355312.1-201ENST00000407115 2176 ntBASIC14.6□□□□□ -0.07
S1PR3Q99500 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
S1PR3Q99500 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
S1PR3Q99500 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
S1PR3Q99500 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.59□□□□□ -0.07
S1PR3Q99500 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
S1PR3Q99500 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.59□□□□□ -0.07
S1PR3Q99500 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.59□□□□□ -0.07
S1PR3Q99500 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.59□□□□□ -0.07
S1PR3Q99500 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.59□□□□□ -0.07
S1PR3Q99500 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
S1PR3Q99500 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.59□□□□□ -0.07
S1PR3Q99500 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
S1PR3Q99500 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.59□□□□□ -0.07
S1PR3Q99500 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.59□□□□□ -0.07
S1PR3Q99500 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.59□□□□□ -0.07
S1PR3Q99500 AP003733.1-201ENST00000491725 852 ntBASIC14.59□□□□□ -0.07
S1PR3Q99500 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.59□□□□□ -0.07
S1PR3Q99500 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.59□□□□□ -0.07
S1PR3Q99500 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 AL590326.2-201ENST00000625139 305 ntBASIC14.59□□□□□ -0.07
S1PR3Q99500 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.59□□□□□ -0.07
S1PR3Q99500 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
S1PR3Q99500 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
S1PR3Q99500 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.59□□□□□ -0.07
S1PR3Q99500 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.59□□□□□ -0.07
S1PR3Q99500 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.59□□□□□ -0.07
S1PR3Q99500 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
S1PR3Q99500 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
S1PR3Q99500 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
S1PR3Q99500 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
S1PR3Q99500 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
S1PR3Q99500 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
S1PR3Q99500 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
S1PR3Q99500 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
S1PR3Q99500 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
S1PR3Q99500 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.58□□□□□ -0.08
S1PR3Q99500 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
S1PR3Q99500 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
S1PR3Q99500 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
S1PR3Q99500 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
S1PR3Q99500 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
S1PR3Q99500 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
S1PR3Q99500 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
S1PR3Q99500 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.58□□□□□ -0.08
S1PR3Q99500 DDX43P3-201ENST00000441064 443 ntBASIC14.58□□□□□ -0.08
S1PR3Q99500 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.58□□□□□ -0.08
S1PR3Q99500 AC092597.1-201ENST00000487352 616 ntBASIC14.58□□□□□ -0.08
S1PR3Q99500 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.58□□□□□ -0.08
S1PR3Q99500 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.58□□□□□ -0.08
S1PR3Q99500 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.58□□□□□ -0.08
S1PR3Q99500 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.58□□□□□ -0.08
S1PR3Q99500 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.58□□□□□ -0.08
S1PR3Q99500 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.58□□□□□ -0.08
S1PR3Q99500 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.58□□□□□ -0.08
S1PR3Q99500 AC004263.2-201ENST00000617183 678 ntBASIC14.58□□□□□ -0.08
S1PR3Q99500 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.58□□□□□ -0.08
S1PR3Q99500 AL023806.1-201ENST00000603994 1649 ntBASIC14.58□□□□□ -0.08
S1PR3Q99500 AC133963.1-201ENST00000504166 1679 ntBASIC14.58□□□□□ -0.08
S1PR3Q99500 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
S1PR3Q99500 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.58□□□□□ -0.08
S1PR3Q99500 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
S1PR3Q99500 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.58□□□□□ -0.08
S1PR3Q99500 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
S1PR3Q99500 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.58□□□□□ -0.08
S1PR3Q99500 LINC01311-201ENST00000565162 1445 ntBASIC14.58□□□□□ -0.08
S1PR3Q99500 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
S1PR3Q99500 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms